New update was just added to the game:

Warning! It is recommened that you restart your current playthrough due to possible incompatibilities of old saves with new update

Ship systems has been remade. Now there is a pool of available ship systems in the game, and you can assign maximum of 4 to your ship. There are old ship systems, and new ones, with them you can get more money or experience, assign powerful buffs to your crew, or spawn support robots on the battle. There is no need to upgrade ship systems anymore, once you assign them, they are fully operational, and you can spend more money on your crew.

Weapon mod station is active now, and you can modify your weapons with different mods.

Starting bonuses reworked, now you can get bonus money or bonus equipment at the start.